Slavic origins

Workflow: merged fastq files -> bwa-aln -> mpileup -> pileupCaller -> DIYDodecad Samples ( https://dx.doi.org/10.1093/gigascience/gix044 ): Archaeological site ID Sample no. Sample no. that passed selection Dating Kowalewko KO 58 48 (11 deep seq.) 100–300 AD Masłomęcz MZ 27 24 200–400 AD Ancient DNA from the Wielbark culture (Kowalewko, deep seq., selected samples) - Eurogenes K36 similarity map Ancient DNA from the Wielbark culture (Kowalewko, shallow seq., all samples) - Eurogenes K36 similarity map Ancient DNA from the Wielbark culture (Masłomęcz, shallow seq., all samples) - Eurogenes K36 similarity map  

 Incomplete list of haplogroups from the Wielbark culture Kowalewko Kow_22 PCA0027 ~ 80-110/120 AD M CTS35 G2a2b2a1a1b1a1a2 https://www.yfull.com/tree/G-Z726/ Kow_24 PCA0029 ~ 10-375 AD unknown I1 or female* Kow_25 PCA0030 ~ 110/120-160 AD F Kow_26 PCA0031 ~ 10-375 AD F Kow_29 PCA0034 ~ 80-260 AD F Kow_31 PCA0036 ~ 80-260 AD M FGC8303 G2a2b2a1a1b1a1a2a1b1 https://www.yfull.com/tree/G-Y3101/ Kow_35 PCA0040 ~ 80-260 AD M CTS12891 G2a2b2a1 , conflicting downstream mutations https://www.yfull.com/tree/G-CTS796/ Kow_41 PCA0046 ~ 110/120-160 AD M S12223 I1a3a1a2a1a ~ https://www.yfull.com/tree/I-S11991/ Kow_48 PCA0053 ~ 80-260 AD F Kow_54 PCA0059 ~ 110/120-160 AD F Kow_57 PCA0062 ~ 80-260 AD M PF3331 G2a2b2a1 https://www.yfull.com/tree/G-CTS796/   Masłomęcz Mas_1 PCA0088 211AD-383AD M low chrX and chrY coverage CTS8868 N1a1a1a1a1a https://www.yfull.com/tree/N-VL29/ Mas_23 PCA0110 124AD-257AD M M CTS6229,CTS3287,CTS12527 E1b1b1a1b1 https://www.yfull.com/tree/E-V13/ Mas_26 P

  Ancient DNA from Medieval Poland – West Eurasian PCA   Workflow: merged fastq files -> bwa-aln -> mpileup -> pileupCaller -> smartpca Samples ( https://dx.doi.org/10.1093/gigascience/gix044 ): Archaeological site ID Sample no. Sample no. that passed selection Dating Sowinki SI 21 19 1000–1100 AD Niemcza NA 36 31 900–1000 AD Markowice ME 8 8 1000–1200 AD Gniezno GO 2 2 1000–1200 AD Łęgowo LO 9 8 1000–1200 AD     Ancient DNA from Medieval Poland - Eurogenes K36 similarity map